iVenomDB

Basic info

Organism	Pogonomyrmex barbatus
Taxonomy	Insecta > Hymenoptera > Formicidae > Pogonomyrmex > Pogonomyrmex barbatus
Protein Description	Venom metalloproteinase 3 isoform X3
Mass Weight	66323 Da
Isoelectric Point	8.31
Expression	Highly expressed in venom gland

Annotation

Pfam

PF13582

Reprolysin_3

Features

Feature key	Position	Length
Signal Peptide	1..19	19
Chain	20..591	572

Cross-Reference

NCBI Nucleotide	XM_011648838.2
NCBI Protein	XP_011647140.1

Sequence

CDS[Download]

ATGACTCGCGCCCTTGTCCTTCTCTGCATGGCCATCATTCTACCTCTCGTACGATGCCACAAGATTCACGAGCACATGACAAGGGAAGAGATGCTATCGGTGTTTTACACGGGACACGAGTCCGTGCCACCGTACGAAGTCGTGCCTGTGTTGCACACGGTGCACAAAAGGAGCGTGGACGCGAAACCACAGATTCACCTGAAGGCCTTCGGCAAAGACATCAGCCTTTCGTTGAAGCCCACGGAAGGACTGTTGACGGCCAACAGCCTGCCGATGTGGACCGTCACCAGGAACACGTCGCAACCGGACGGCCTTCACTATGAGAGGGTAAAGGATGTCGACGTGGATATCGGTGACATCTATCAAGACACGGAGAACATGGCTTCCATTCTGCTACACCAAGACACGAATGGGAAAGTGCGCGTTGATGGAACCATCGGTTCAGAATTAGTTATTCGGCCACTGCCAGAACGGGTTCTACAAGAAGTAGTGAGCCGAGCTCCAATTCTTTGTGAATCCAAACTACTGCCTAACGTAACTAGCACAGAAGACTTGAAACGCACAAGTCATCACATCGTTTTCAAAAAGGTGGATCGACCTGCCGGCGATGAGTACAGCGACTTTTCGCTCATGGAACCCGACCACTTAGCCAAGAGATATAGGATTAAGCGTTCGATCAATAGCAGATCGAAGCGCGAAGCACCGTACGTCATTTACCCGGAAATCCTTTGCATAGTGGATTACGATGGGTACAGATTGCACGGCGGCGATAACGTACAGATAAAGAGATACTTTGTTTCCTTTTGGAACGGAGTTGATCTGAGGTATAAGTTACTGAAGGGGCCAAAAATACGTATCAGTATAGCGGGAATAATTATCTCACGGGGACGAGACGCGACACCATACTTAGAGAGGAATCGCGTGGGAAGAGACGCAATCGACTCGGCAGCCGCTCTGACTGACATGGGCAAATACCTTTTCCGGGAGAGGAGACTTCCTGTATACGACATCGCCGTCGCCGTTACAAAATTAGATATGTGCAGGAGGCAATACGCGAATGATGTGTGCAATAGAGGAACCGCAGGATTCGCGTACGTCGGCGGGGCGTGCGTCGTGAATAAGCGCCTCGAGAAGGTGAATTCGGTCGCCATCATCGAGGATACCGGCGGATTCAGCGGTATAATCGTCGCCGCACACGAAGTCGGCCACTTATTGGGTGCTGTCCATGATGGTTCACCTCCGCCTAGTTACTTGGGTGGACCAGGCGCCGAAAAGTGTCGTTGGGAAGATGGGTATATCATGAGCGATCTTAGGCACACCGAGAAGGGTTTCAAATGGTCCCACTGCAGCGTGTCCTCCTTCCATCACTTTTTAAATGGTGATACAGCGACTTGCTTGTACAATGCGCCTCATGAAGACGAGGCATTGCCCAGAGTGCTTCCGGGAAAACTTCTATCCTTAGATGCACAATGTCGGAAAGATCGCGGAACAAGCGCTTGTTTCAAAGACGATCGAGTTTGCGCTCAGCTGTTCTGTTTCGACGCTGGATCCGGATATTGCGTCGCATATCGGCCAGCAGCGGAAGGTTCGCCATGTGGAGATGGTCAGTATTGCCTGAACGGGAAGTGCGTGGCGGAGCACGAAAACATAATACCGGATTATACGCAAAACATTCCGACGTATGTGCGCCGAGACAGCATATTCAATTCCGCATTACATACCCGGCCGATATTCGCTCATTATAACAACACAGACTACAGGAACAGAGGTCGGTGA

Protein[Download]

MTRALVLLCMAIILPLVRCHKIHEHMTREEMLSVFYTGHESVPPYEVVPVLHTVHKRSVDAKPQIHLKAFGKDISLSLKPTEGLLTANSLPMWTVTRNTSQPDGLHYERVKDVDVDIGDIYQDTENMASILLHQDTNGKVRVDGTIGSELVIRPLPERVLQEVVSRAPILCESKLLPNVTSTEDLKRTSHHIVFKKVDRPAGDEYSDFSLMEPDHLAKRYRIKRSINSRSKREAPYVIYPEILCIVDYDGYRLHGGDNVQIKRYFVSFWNGVDLRYKLLKGPKIRISIAGIIISRGRDATPYLERNRVGRDAIDSAAALTDMGKYLFRERRLPVYDIAVAVTKLDMCRRQYANDVCNRGTAGFAYVGGACVVNKRLEKVNSVAIIEDTGGFSGIIVAAHEVGHLLGAVHDGSPPPSYLGGPGAEKCRWEDGYIMSDLRHTEKGFKWSHCSVSSFHHFLNGDTATCLYNAPHEDEALPRVLPGKLLSLDAQCRKDRGTSACFKDDRVCAQLFCFDAGSGYCVAYRPAAEGSPCGDGQYCLNGKCVAEHENIIPDYTQNIPTYVRRDSIFNSALHTRPIFAHYNNTDYRNRGR

3D Structure

Not available now!

Publication

1.

Smith CR, Smith CD, Robertson HM, Helmkampf M, Zimin A, Yandell M, Holt C, Hu H, Abouheif E, Benton R, Cash E, Croset V, Currie CR, Elhaik E, Elsik CG, Favé MJ, Fernandes V, Gibson JD, Graur D, Gronenberg W, Grubbs KJ, Hagen DE, Viniegra AS, Johnson BR, Johnson RM, Khila A, Kim JW, Mathis KA, Munoz-Torres MC, Murphy MC, Mustard JA, Nakamura R, Niehuis O, Nigam S, Overson RP, Placek JE, Rajakumar R, Reese JT, Suen G, Tao S, Torres CW, Tsutsui ND, Viljakainen L, Wolschin F, Gadau J.;
Draft genome of the red harvester ant Pogonomyrmex barbatus.;
Proc Natl Acad Sci U S A 2011 Apr 5;108(14):5667-72.

Venom Protein Card